Use consistent log file names, introduced initLogger (#3403)
### What problem does this PR solve? Use consistent log file names, introduced initLogger ### Type of change - [ ] Bug Fix (non-breaking change which fixes an issue) - [ ] New Feature (non-breaking change which adds functionality) - [ ] Documentation Update - [x] Refactoring - [ ] Performance Improvement - [ ] Other (please describe):
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@@ -13,13 +13,13 @@
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# See the License for the specific language governing permissions and
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# limitations under the License.
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#
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import logging
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from abc import ABC
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from Bio import Entrez
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import re
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import pandas as pd
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import xml.etree.ElementTree as ET
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from agent.component.base import ComponentBase, ComponentParamBase
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from api.utils.log_utils import logger
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class PubMedParam(ComponentParamBase):
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@@ -65,5 +65,5 @@ class PubMed(ComponentBase, ABC):
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return PubMed.be_output("")
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df = pd.DataFrame(pubmed_res)
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logger.debug(f"df: {df}")
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logging.debug(f"df: {df}")
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return df
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